PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_003442-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 343aa    MW: 37878.1 Da    PI: 6.511
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_003442-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.80.000442082461255
                    HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  NNU_003442-RA 208 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 246
                    6677889999999999998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.033196245IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.79E-10206257IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.43E-6206250No hitNo description
Gene3DG3DSA:4.10.280.102.0E-7210253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MNRGVLQSSP VQQMMAGSPN WWSINNMRPP PQQPSPLLPS PSSFFPQYTP PPSSLPVTYW  60
NDNQDLPESW SQLLLGGLVG EEDRAGLNHF HHAKKMENWE DQLLYTSQNV PVVDVKQEVS  120
ENGYVYGHGN EEFQAARSSS WSQIMPASSP RSCITSFSSN MLDFSNNKSD GRHQKPDHSS  180
ECNSTATGGV FKKARVQPPS TQPTFKVRKE KLGDRITALH QLVSPFGKTD TASVLLEAIG  240
YIRFLQSQIE ALSSPYLGTG SGNKGQQQSV QGERNCIFPE DPGQLLNDNC IKRRGAPEQD  300
SEDEPKKDLR SRGLCLVPIS FTVHVGSDNG ADYWAPSLGG GFR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010249647.10.0PREDICTED: transcription factor bHLH68-like
SwissprotQ8S3D11e-104BH068_ARATH; Transcription factor bHLH68
TrEMBLD7TBK30.0D7TBK3_VITVI; Putative uncharacterized protein
STRINGVIT_11s0016g03560.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.12e-99bHLH family protein